C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: monocyte to macrophage differentiation-associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037048 Mmd2-201 ENSMUSG00000039533 10090 - 5:142562365-142608800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037048
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037048 0.585±0.32 29.861±14.17 0.110±0.02 7.527±1.90 3.634±0.34 0.220±0.09 0.099±0.04 0.776±0.07 6.504±5.21 0.047±0.03 0.014±0.01 8.644±3.45 0.443±0.47 5.562±3.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ME CIL_0002ME_0002 CGP 5:142525838-142608800

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0016021 IEA integral component of membrane
GO:0019835 IEA cytolysis
GO:0048471 ISO perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126096 mmd2a-201 protein_coding Danio_rerio 0 316
ENSDART00000143207 mmd2a-001 protein_coding Danio_rerio 0 313
ENSDART00000150081 mmd2a-002 protein_coding Danio_rerio 0 244
ENST00000401401 MMD2-002 protein_coding Homo_sapiens 0 939
ENST00000404774 MMD2-001 protein_coding Homo_sapiens 0 553
ENST00000406755 MMD2-003 protein_coding Homo_sapiens 0 643
ENST00000612910 MMD2-201 protein_coding Homo_sapiens 0 643

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