C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin homology 2 domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037097 Fhod3-201 ENSMUSG00000034295 10090 + 18:24709445-25133500 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037097
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037097 0.523±0.25 1.474±0.84 4.248±1.56 7.481±2.13 1.005±0.53 0.292±0.17 20.926±6.82 1.777±0.38 0.132±0.08 0.723±0.30 4.085±2.36 3.770±2.13 0.532±0.29 0.143±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VO CIL_0003VO_0002 CGP 18:24709445-25169007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005865 IEA striated muscle thin filament
GO:0030017 IDA sarcomere
GO:0030837 IDA negative regulation of actin filament polymerization
GO:0045214 IGI sarcomere organization
GO:0051639 IDA actin filament network formation
GO:0055003 IMP cardiac myofibril assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093281 FHOD3 (2 of 2)-201 protein_coding Danio_rerio 0 431
ENSDART00000146050 FHOD3 (2 of 2)-001 protein_coding Danio_rerio 0 375
ENSDART00000073447 FHOD1-201 protein_coding Danio_rerio 4e-38 165
ENST00000257209 FHOD3-004 protein_coding Homo_sapiens 0 3502
ENST00000359247 FHOD3-001 protein_coding Homo_sapiens 0 3011
ENST00000585579 FHOD3-009 protein_coding Homo_sapiens 0 1273
ENST00000589114 FHOD3-003 retained_intron Homo_sapiens 0 1428
ENST00000590592 FHOD3-002 protein_coding Homo_sapiens 0 3127
ENST00000591635 FHOD3-005 protein_coding Homo_sapiens 0 2351
ENST00000592128 FHOD3-010 protein_coding Homo_sapiens 0 2300
ENST00000592930 FHOD3-007 protein_coding Homo_sapiens 0 3489

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