C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein-like 3 (nucleolar)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037739 Gnl3-201 ENSMUSG00000042354 10090 - 14:31012434-31019089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000037739
Transcript ID Adipose Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000037739 12.118±0.04 18.522±0.91 15.153±4.39 8.695±1.24 6.464±0.88 35.308±22.28 10.276±0.53 29.465±12.78 48.715±37.21 18.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IBA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 ISS GTP binding
GO:0005615 IEA extracellular space
GO:0005634 ISS nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 ISS nucleolus
GO:0006184 IBA GTP catabolic process
GO:0008283 IEA cell proliferation
GO:0016020 IEA membrane
GO:0042127 ISS regulation of cell proliferation
GO:0042254 IBA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394799 GNL3-002 protein_coding Homo_sapiens 0 1230
ENST00000418458 GNL3-001 protein_coding Homo_sapiens 0 1249
ENST00000460073 GNL3-009 processed_transcript Homo_sapiens 0 300
ENST00000462550 GNL3-006 retained_intron Homo_sapiens 0 387
ENST00000468146 GNL3-007 processed_transcript Homo_sapiens 0 405
ENST00000474423 GNL3-008 protein_coding Homo_sapiens 0 372
ENST00000479230 GNL3-011 protein_coding Homo_sapiens 0 414
ENST00000484022 GNL3-010 retained_intron Homo_sapiens 0 436
ENST00000492349 GNL3-003 nonsense_mediated_decay Homo_sapiens 0 599
ENST00000496254 GNL3-004 retained_intron Homo_sapiens 0 664

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