C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-O-mannosyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037788 Pomt2-201 ENSMUSG00000034126 10090 - 12:87106866-87147902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037788 10.176±0.11 7.167±0.48 6.479±0.12 5.231±2.85 7.253±0.40 6.301±0.55 4.418±0.49 7.871±1.29 2.677±0.19 8.058±0.51 1.940±0.24 10.842±3.34 5.155±0.97 14.029±7.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_0003OZ CIL_0003OZ_0002 CGP 12:87097531-87147902
CIL_0003P2 CIL_0003P2_0002 CGP 12:87106866-87164721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004169 IEA dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005789 ISS endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0035269 IEA protein O-linked mannosylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261534 POMT2-001 protein_coding Homo_sapiens 0 2916
ENST00000452340 POMT2-003 retained_intron Homo_sapiens 0 2340
ENST00000553863 POMT2-009 processed_transcript Homo_sapiens 0 593
ENST00000553880 POMT2-014 retained_intron Homo_sapiens 0 475
ENST00000554564 POMT2-017 retained_intron Homo_sapiens 0 228
ENST00000554767 POMT2-004 retained_intron Homo_sapiens 0 1825
ENST00000554884 POMT2-015 processed_transcript Homo_sapiens 0 388
ENST00000554948 POMT2-005 protein_coding Homo_sapiens 0 630
ENST00000555134 POMT2-021 retained_intron Homo_sapiens 0 660
ENST00000555675 POMT2-010 retained_intron Homo_sapiens 0 676
ENST00000555710 POMT2-019 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000555788 POMT2-006 processed_transcript Homo_sapiens 0 274
ENST00000556171 POMT2-018 protein_coding Homo_sapiens 0 374
ENST00000556326 POMT2-002 nonsense_mediated_decay Homo_sapiens 0 715
ENST00000556394 POMT2-022 protein_coding Homo_sapiens 0 335
ENST00000556446 POMT2-020 retained_intron Homo_sapiens 0 272
ENST00000556880 POMT2-008 processed_transcript Homo_sapiens 0 311
ENST00000557525 POMT2-007 retained_intron Homo_sapiens 0 307
ENST00000557675 POMT2-012 processed_transcript Homo_sapiens 0 638
ENST00000602717 POMT2-023 processed_transcript Homo_sapiens 0 375

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