C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CKLF-like MARVEL transmembrane domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037814 Cmtm5-201 ENSMUSG00000040759 10090 + 14:54936470-54939256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037814
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037814 0.703±0.30 1.185±0.19 2.399±0.71 4.065±3.31 1.780±0.81 1.674±0.54 0.935±0.17 0.311±0.11 0.048±0.04 0.649±0.22 0.339±0.08 0.811±0.42 0.450±0.17 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830
CIL_0003BX CIL_0003BX_0002 CGP 14:54932695-54939256
CIL_00051L CIL_00051L_0002 CGP 14:54936470-54966927

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005125 IEA cytokine activity
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0006935 IEA chemotaxis
GO:0016021 IEA integral component of membrane
GO:0045662 IMP negative regulation of myoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339180 CMTM5-003 protein_coding Homo_sapiens 0 313
ENST00000359320 CMTM5-001 protein_coding Homo_sapiens 0 560
ENST00000382809 CMTM5-009 protein_coding Homo_sapiens 0 307
ENST00000397227 CMTM5-005 protein_coding Homo_sapiens 0 254
ENST00000553750 CMTM5-006 retained_intron Homo_sapiens 0 433
ENST00000555487 CMTM5-008 retained_intron Homo_sapiens 2.8026e-45 187
ENST00000555731 CMTM5-007 protein_coding Homo_sapiens 0 289

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