C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 45, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037827 Slc45a1-001 ENSMUSG00000039838 10090 - 4:150628572-150652174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000037827
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000037827 0.344±0.16 0.019±0.00 2.061±0.40 0.006±0.00 0.328±0.14 0.043±0.02 0.010±0.01 0.024±0.00 0.023±0.01 0.060±0.00 0.133±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0002 VISTA 4:150524120-151125978

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008643 IEA carbohydrate transport
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102760 slc45a1-202 protein_coding Danio_rerio 0 383
ENSDART00000134560 slc45a1-001 protein_coding Danio_rerio 0 383
ENST00000289877 SLC45A1-201 protein_coding Homo_sapiens 0 2292
ENST00000471889 SLC45A1-001 protein_coding Homo_sapiens 0 2344
ENST00000481265 SLC45A1-005 processed_transcript Homo_sapiens 0 501
ENST00000497660 SLC45A1-002 retained_intron Homo_sapiens 0 1445

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