C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2210018M11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038359 2210018M11Rik-201 ENSMUSG00000035401 10090 - 7:98590615-98656569 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038359 4.718±2.62 2.986±0.75 2.460±0.72 6.372±1.96 2.734±0.69 3.359±0.45 2.497±0.72 2.612±0.48 1.713±0.91 3.984±0.72 0.719±0.32 4.932±1.86 3.282±1.57 3.411±1.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0042803 IPI protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334736 C11orf30-201 protein_coding Homo_sapiens 0 2808
ENST00000427574 C11orf30-007 retained_intron Homo_sapiens 0 1059
ENST00000524451 C11orf30-016 protein_coding Homo_sapiens 0 484
ENST00000524490 C11orf30-005 protein_coding Homo_sapiens 0 3694
ENST00000524767 C11orf30-002 protein_coding Homo_sapiens 0 2808
ENST00000525038 C11orf30-004 protein_coding Homo_sapiens 0 4745
ENST00000525919 C11orf30-012 protein_coding Homo_sapiens 0 2808
ENST00000525959 C11orf30-014 processed_transcript Homo_sapiens 0 627
ENST00000528826 C11orf30-006 retained_intron Homo_sapiens 0 612
ENST00000529032 C11orf30-001 protein_coding Homo_sapiens 0 2808
ENST00000531641 C11orf30-010 retained_intron Homo_sapiens 0 2030
ENST00000531793 C11orf30-018 protein_coding Homo_sapiens 0 351
ENST00000531998 C11orf30-015 protein_coding Homo_sapiens 0 475
ENST00000532719 C11orf30-011 protein_coding Homo_sapiens 0 985
ENST00000533248 C11orf30-003 protein_coding Homo_sapiens 0 2266
ENST00000533972 C11orf30-013 protein_coding Homo_sapiens 0 398
ENST00000533988 C11orf30-009 protein_coding Homo_sapiens 0 630
ENST00000534573 C11orf30-017 retained_intron Homo_sapiens 0 566

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