C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700123O20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038539 1700123O20Rik-201 ENSMUSG00000040822 10090 + 14:54686171-54690742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000038539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000038539 21.394±1.44 21.631±2.78 30.530±0.94 41.226±0.00 23.243±3.43 17.186±2.39 7.908±0.73 20.115±4.58 25.029±14.37 18.191±1.24 24.501±2.73 32.321±9.16 16.139±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0006MN CIL_0006MN_0002 CGP 14:54642161-54690742
CIL_0006N2 CIL_0006N2_0002 CGP 14:54686171-54712174

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262710 ACIN1-003 protein_coding Homo_sapiens 0 656
ENST00000319074 C14orf119-001 protein_coding Homo_sapiens 0 1378
ENST00000398764 RP11-18B16.1-001 processed_pseudogene Homo_sapiens 0 424
ENST00000457657 ACIN1-201 protein_coding Homo_sapiens 0 656
ENST00000554203 C14orf119-002 protein_coding Homo_sapiens 0 488
ENST00000555053 ACIN1-006 protein_coding Homo_sapiens 0 518
ENST00000605057 ACIN1-022 protein_coding Homo_sapiens 0 327

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