C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tousled-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038584 Tlk1-001 ENSMUSG00000041997 10090 - 2:70712407-70825728 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000038584
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000038584 8.154±1.45 9.388±0.24 9.868±4.08 9.425±1.14 5.360±0.53 9.199±1.68 9.486±5.24 10.515±1.12 8.758±1.62 13.034±1.49 3.563±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IO CIL_0003IO_0003 CGP 2:70661576-70825728
CIL_0004S9 CIL_0004S9_0002 CGP 2:70712407-71055583

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001672 ISS regulation of chromatin assembly or disassembly
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005524 ISS ATP binding
GO:0005634 ISS nucleus
GO:0006468 ISS protein phosphorylation
GO:0006886 IEA intracellular protein transport
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0016568 IEA chromatin modification
GO:0035556 ISS intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141937 tlk2-001 protein_coding Danio_rerio 0 739
ENSDART00000006490 tlk2-002 protein_coding Danio_rerio 0 739
ENST00000359766 TLK1-004 nonsense_mediated_decay Homo_sapiens 0 1526
ENST00000360843 TLK1-002 protein_coding Homo_sapiens 0 2647
ENST00000409443 TLK1-003 nonsense_mediated_decay Homo_sapiens 0 1905
ENST00000413010 TLK1-011 processed_transcript Homo_sapiens 0 784
ENST00000431350 TLK1-001 protein_coding Homo_sapiens 0 3426
ENST00000434911 TLK1-005 protein_coding Homo_sapiens 0 2747
ENST00000453628 TLK1-010 protein_coding Homo_sapiens 0 409
ENST00000456760 TLK1P1-001 processed_pseudogene Homo_sapiens 0 1768
ENST00000478683 TLK1-006 retained_intron Homo_sapiens 0 715
ENST00000486857 TLK1-009 processed_transcript Homo_sapiens 0 645
ENST00000521943 TLK1-012 protein_coding Homo_sapiens 0 3022

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