C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 5, zeta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038699 Ap5z1-201 ENSMUSG00000039623 10090 + 5:142463931-142478715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038699
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038699 5.096±1.32 11.803±1.12 4.673±0.29 4.379±2.71 6.044±1.94 9.369±0.90 2.217±0.87 5.815±0.63 3.028±0.59 5.832±0.91 0.977±0.41 6.751±2.97 3.478±1.93 1.912±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MF CIL_0002MF_0002 CGP 5:142401497-142478715
CIL_0002MG CIL_0002MG_0002 CGP 5:142463931-142551098

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 ISS double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0015031 IEA protein transport
GO:0016197 ISS endosomal transport
GO:0044599 IEA AP-5 adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348624 AP5Z1-001 protein_coding Homo_sapiens 0 1796
ENST00000401897 AP5Z1-201 protein_coding Homo_sapiens 0 1796
ENST00000469614 AP5Z1-004 retained_intron Homo_sapiens 0 499
ENST00000477680 AP5Z1-002 retained_intron Homo_sapiens 0 499
ENST00000490487 AP5Z1-008 processed_transcript Homo_sapiens 0 316
ENST00000496303 AP5Z1-003 retained_intron Homo_sapiens 0 499

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