C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin carboxyl-terminal esterase L4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039011 Uchl4-201 ENSMUSG00000035337 10090 + 9:64235201-64236362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039011 0.251±0.00 0.199±0.01 0.119±0.04 0.177±0.12 0.219±0.09 0.503±0.33 0.124±0.03 0.136±0.00 0.102±0.07 0.134±0.08 0.051±0.00 0.311±0.26 0.261±0.25 0.162±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q7 CIL_0008Q7_0002 VISTA 9:63744784-64346949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IEA ubiquitin-specific protease activity
GO:0005737 IEA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377595 UCHL3-001 protein_coding Homo_sapiens 0 944
ENST00000419068 UCHL3-003 protein_coding Homo_sapiens 0 374
ENST00000471792 UCHL3-002 processed_transcript Homo_sapiens 0 632
ENST00000606347 UCHL3-005 processed_transcript Homo_sapiens 0 440
ENST00000618773 UCHL3-201 protein_coding Homo_sapiens 0 861

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