C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proprotein convertase subtilisin/kexin type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039059 Pcsk7-201 ENSMUSG00000035382 10090 + 9:45906569-45929692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000039059
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000039059 23.872±2.26 14.923±1.15 18.051±2.78 20.376±1.72 10.032±1.25 17.976±4.47 11.792±3.49 22.398±2.45 4.492±0.56 18.498±6.03 10.866±3.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546
CIL_0005WN CIL_0005WN_0002 CGP 9:45906569-45936058

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IBA serine-type endopeptidase activity
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005794 IBA Golgi apparatus
GO:0006508 IEA proteolysis
GO:0008233 ISO peptidase activity
GO:0016485 IBA protein processing
GO:0030173 IEA integral component of Golgi membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320934 PCSK7-001 protein_coding Homo_sapiens 0 2586
ENST00000525027 PCSK7-004 protein_coding Homo_sapiens 0 1072
ENST00000527037 PCSK7-009 retained_intron Homo_sapiens 0 778
ENST00000528217 PCSK7-008 retained_intron Homo_sapiens 0 270
ENST00000528464 RP11-109L13.1-001 unprocessed_pseudogene Homo_sapiens 0 643
ENST00000532810 PCSK7-012 retained_intron Homo_sapiens 0 298
ENST00000533135 PCSK7-010 processed_transcript Homo_sapiens 0 464
ENST00000534529 PCSK7-003 retained_intron Homo_sapiens 0 911
ENST00000540028 PCSK7-201 protein_coding Homo_sapiens 0 2102

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