C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyruvate dehydrogenase phosphatase regulatory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039333 Pdpr-001 ENSMUSG00000033624 10090 + 8:111094641-111137074 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039333 8.963±1.27 5.108±0.40 5.403±0.33 3.381±2.01 9.952±3.02 4.297±1.10 11.673±5.34 9.331±0.77 2.488±1.12 3.618±0.40 24.035±2.28 4.291±2.00 1.724±0.31 4.121±1.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004047 IEA aminomethyltransferase activity
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006546 IEA glycine catabolic process
GO:0016491 IEA oxidoreductase activity
GO:0032259 IEA methylation
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288050 PDPR-001 protein_coding Homo_sapiens 0 3208
ENST00000398122 PDPR-003 protein_coding Homo_sapiens 0 2977
ENST00000429810 RP11-252A24.2-003 retained_intron Homo_sapiens 0 824
ENST00000561920 PDPR-002 retained_intron Homo_sapiens 0 1552
ENST00000562100 PDPR-006 processed_transcript Homo_sapiens 0 1552
ENST00000563377 RP11-252A24.2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 2484
ENST00000563930 PDPR-009 protein_coding Homo_sapiens 0 628
ENST00000564563 PDPR-008 nonsense_mediated_decay Homo_sapiens 0 771
ENST00000565186 PDPR-004 nonsense_mediated_decay Homo_sapiens 0 1834
ENST00000565724 RP11-252A24.2-007 retained_intron Homo_sapiens 0 599
ENST00000566802 RP11-252A24.2-002 retained_intron Homo_sapiens 0 1495
ENST00000567046 PDPR-007 protein_coding Homo_sapiens 0 900
ENST00000567896 PDPR-011 protein_coding Homo_sapiens 0 477
ENST00000568530 PDPR-005 protein_coding Homo_sapiens 0 3208
ENST00000569042 PDPR-010 protein_coding Homo_sapiens 0 699

Loading