C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mucolipin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039450 Mcoln3-001 ENSMUSG00000036853 10090 + 3:146121672-146141806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000039450
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000039450 0.041±0.01 0.014±0.00 0.115±0.02 0.519±0.19 0.095±0.04 0.016±0.00 0.695±0.01 0.049±0.02 0.077±0.00 0.133±0.10 0.393±0.44 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QR CIL_0007QR_0002 VISTA 3:145664099-146264929
CIL_00069E CIL_00069E_0002 CGP 3:146040526-146141806

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006811 IEA ion transport
GO:0007626 IMP locomotory behavior
GO:0016021 IEA integral component of membrane
GO:0042491 IMP auditory receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341115 MCOLN3-002 protein_coding Homo_sapiens 0 1349
ENST00000370587 MCOLN3-006 protein_coding Homo_sapiens 0 929
ENST00000370589 MCOLN3-001 protein_coding Homo_sapiens 0 1711
ENST00000474447 MCOLN3-005 processed_transcript Homo_sapiens 0 625
ENST00000475312 MCOLN3-004 processed_transcript Homo_sapiens 0 399
ENST00000490600 MCOLN3-003 nonsense_mediated_decay Homo_sapiens 0 723

Loading