C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039928 Plekhh1-201 ENSMUSG00000060716 10090 + 12:79029163-79081648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039928
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039928 3.260±0.06 1.181±0.31 6.847±0.16 1.983±0.27 2.600±0.83 17.312±2.13 0.482±0.10 1.665±0.72 0.165±0.07 3.157±1.06 0.163±0.05 5.379±1.65 29.970±12.62 0.976±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D4 CIL_0003D4_0002 CGP 12:78961795-79081648
CIL_0003DC CIL_0003DC_0002 CGP 12:79029163-79089670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329153 PLEKHH1-001 protein_coding Homo_sapiens 0 4285
ENST00000557971 PLEKHH1-004 retained_intron Homo_sapiens 0 3177
ENST00000558296 PLEKHH1-017 retained_intron Homo_sapiens 0 198
ENST00000558366 PLEKHH1-010 retained_intron Homo_sapiens 0 606
ENST00000558386 PLEKHH1-002 retained_intron Homo_sapiens 0 3345
ENST00000558981 PLEKHH1-003 retained_intron Homo_sapiens 0 819
ENST00000559766 PLEKHH1-011 retained_intron Homo_sapiens 3e-40 169
ENST00000559832 PLEKHH1-016 processed_transcript Homo_sapiens 2e-32 141
ENST00000559981 PLEKHH1-006 retained_intron Homo_sapiens 0 933
ENST00000560100 PLEKHH1-009 retained_intron Homo_sapiens 0 425
ENST00000561057 PLEKHH1-013 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000561135 PLEKHH1-014 retained_intron Homo_sapiens 0 252
ENST00000561370 PLEKHH1-007 nonsense_mediated_decay Homo_sapiens 0 730
ENST00000561456 PLEKHH1-008 retained_intron Homo_sapiens 0 470

Loading