C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040241 Ddx19b-001 ENSMUSG00000033658 10090 - 8:111003188-111027764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040241 2.313±0.36 1.443±0.23 2.854±0.09 4.535±0.48 1.829±0.58 1.839±0.56 1.587±0.32 1.550±0.34 2.348±0.34 2.562±0.27 3.200±0.17 2.715±0.87 1.431±0.37 12.250±3.75

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288071 DDX19B-001 protein_coding Homo_sapiens 0 1999
ENST00000302243 DDX19A-001 protein_coding Homo_sapiens 0 1748
ENST00000355992 DDX19B-004 protein_coding Homo_sapiens 0 1509
ENST00000393657 DDX19B-009 protein_coding Homo_sapiens 0 1792
ENST00000417604 DDX19A-004 protein_coding Homo_sapiens 0 1408
ENST00000443119 DDX19A-201 protein_coding Homo_sapiens 0 1881
ENST00000451014 DDX19B-006 protein_coding Homo_sapiens 0 1454
ENST00000561574 DDX19A-011 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000562140 DDX19A-017 retained_intron Homo_sapiens 0 1033
ENST00000562509 DDX19A-005 processed_transcript Homo_sapiens 0.00000000000001 84
ENST00000562519 DDX19B-008 nonsense_mediated_decay Homo_sapiens 0 1524
ENST00000562649 DDX19A-012 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000563206 DDX19B-011 protein_coding Homo_sapiens 0 1934
ENST00000563392 DDX19B-005 protein_coding Homo_sapiens 0 1786
ENST00000565116 RP11-529K1.3-001 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000566167 DDX19A-009 nonsense_mediated_decay Homo_sapiens 3e-21 106
ENST00000566216 DDX19B-013 protein_coding Homo_sapiens 0 863
ENST00000566574 DDX19A-008 retained_intron Homo_sapiens 0 1171
ENST00000567012 DDX19A-006 retained_intron Homo_sapiens 0 399
ENST00000567706 RP11-529K1.3-002 protein_coding Homo_sapiens 0 985
ENST00000568008 DDX19B-014 nonsense_mediated_decay Homo_sapiens 0 813
ENST00000568408 DDX19B-003 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000568625 DDX19B-007 protein_coding Homo_sapiens 0 1764
ENST00000568779 DDX19A-015 retained_intron Homo_sapiens 0 361
ENST00000569319 DDX19A-003 nonsense_mediated_decay Homo_sapiens 0 1153
ENST00000569771 DDX19A-002 nonsense_mediated_decay Homo_sapiens 0 1408
ENST00000575878 DDX19A-007 protein_coding Homo_sapiens 0 1513

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