C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A930018P22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040374 A930018P22Rik-001 ENSMUSG00000032671 10090 + 2:104122769-104124749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040374 0.379±0.27 0.930±0.54 0.059±0.01 0.021±0.00 0.392±0.21 0.056±0.02 0.037±0.00 0.101±0.06 0.136±0.07 0.069±0.03 0.229±0.11 0.278±0.17 0.171±0.07 20.647±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000929 CIL_000929_0002 VISTA 2:103593010-104195664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379011 C11orf91-001 protein_coding Homo_sapiens 0 771
ENST00000525763 CD59-011 nonsense_mediated_decay Homo_sapiens 5e-30 135
ENST00000527926 CD59-013 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000534312 CD59-012 protein_coding Homo_sapiens 0 241

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