C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040416 Ddx19a-001 ENSMUSG00000015023 10090 - 8:110974996-110997800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040416
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040416 2.751±0.74 1.921±0.55 6.304±0.16 14.658±2.47 1.562±0.00 4.582±0.43 1.959±0.93 2.547±0.96 9.131±7.77 4.147±0.55 1.793±0.43 9.395±6.48 11.866±4.29 2.331±0.97

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005643 IEA nuclear pore
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0010043 IEA response to zinc ion
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0043065 IEA positive regulation of apoptotic process
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288071 DDX19B-001 protein_coding Homo_sapiens 0 1794
ENST00000302243 DDX19A-001 protein_coding Homo_sapiens 0 1954
ENST00000355992 DDX19B-004 protein_coding Homo_sapiens 0 1371
ENST00000393657 DDX19B-009 protein_coding Homo_sapiens 0 1646
ENST00000417604 DDX19A-004 protein_coding Homo_sapiens 0 1439
ENST00000443119 DDX19A-201 protein_coding Homo_sapiens 0 1879
ENST00000451014 DDX19B-006 protein_coding Homo_sapiens 0 1371
ENST00000561574 DDX19A-011 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000562140 DDX19A-017 retained_intron Homo_sapiens 0 1072
ENST00000562509 DDX19A-005 processed_transcript Homo_sapiens 0 399
ENST00000562519 DDX19B-008 nonsense_mediated_decay Homo_sapiens 0 1371
ENST00000562649 DDX19A-012 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000563206 DDX19B-011 protein_coding Homo_sapiens 0 1720
ENST00000563392 DDX19B-005 protein_coding Homo_sapiens 0 1648
ENST00000565116 RP11-529K1.3-001 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000565195 DDX19A-013 retained_intron Homo_sapiens 0 231
ENST00000566216 DDX19B-013 protein_coding Homo_sapiens 0 730
ENST00000566574 DDX19A-008 retained_intron Homo_sapiens 0 1170
ENST00000567706 RP11-529K1.3-002 protein_coding Homo_sapiens 0 880
ENST00000568008 DDX19B-014 nonsense_mediated_decay Homo_sapiens 0 758
ENST00000568408 DDX19B-003 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000568625 DDX19B-007 protein_coding Homo_sapiens 0 1677
ENST00000569244 DDX19A-018 processed_transcript Homo_sapiens 0 399
ENST00000569319 DDX19A-003 nonsense_mediated_decay Homo_sapiens 0 1158
ENST00000569771 DDX19A-002 nonsense_mediated_decay Homo_sapiens 0 1439
ENST00000575878 DDX19A-007 protein_coding Homo_sapiens 0 1555

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