C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondroadherin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040418 Chad-001 ENSMUSG00000039084 10090 + 11:94565047-94569127 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040418 0.278±0.10 0.581±0.11 0.683±0.01 0.188±0.08 0.413±0.09 1.442±0.49 3.736±1.74 0.170±0.08 0.345±0.31 13.616±0.18 5.630±1.63 1.679±1.06 0.396±0.09 0.126±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X5 CIL_0004X5_0003 CGP 11:94557102-94601871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001502 IEA cartilage condensation
GO:0005578 IEA proteinaceous extracellular matrix
GO:0060348 IMP bone development
GO:1900155 IMP negative regulation of bone trabecula formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258969 CHAD-002 protein_coding Homo_sapiens 0 1280
ENST00000506187 CHAD-005 protein_coding Homo_sapiens 1e-29 134
ENST00000508540 CHAD-001 protein_coding Homo_sapiens 0 1325
ENST00000508734 ACSF2-017 processed_transcript Homo_sapiens 3e-16 88

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