C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radical S-adenosyl methionine domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040487 Rsad1-001 ENSMUSG00000039096 10090 - 11:94539798-94549199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040487 5.480±0.45 9.061±2.05 5.654±0.36 2.272±0.26 4.674±0.66 3.883±0.87 4.055±1.60 2.664±0.67 1.433±0.79 4.590±0.26 1.494±0.57 9.907±3.83 0.896±0.20 1.387±0.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004109 IEA coproporphyrinogen oxidase activity
GO:0005739 IDA mitochondrion
GO:0006779 IEA porphyrin-containing compound biosynthetic process
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258955 RSAD1-001 protein_coding Homo_sapiens 0 1293
ENST00000504284 RSAD1-004 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000506211 RSAD1-006 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000513650 RSAD1-008 retained_intron Homo_sapiens 0 254
ENST00000515221 RSAD1-003 nonsense_mediated_decay Homo_sapiens 1e-27 128

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