C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 13, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040506 Fam13b-201 ENSMUSG00000036501 10090 - 18:34442352-34506823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040506
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040506 6.012±2.30 20.598±5.95 11.805±2.74 6.348±2.14 5.046±1.91 2.532±0.24 3.705±0.78 6.367±3.93 5.620±0.35 1.377±0.35 9.216±4.23 10.350±3.47 17.114±6.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OZ CIL_0005OZ_0002 CGP 18:34409423-34506823
CIL_0005OW CIL_0005OW_0002 CGP 18:34442352-34548273

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000033079 FAM13B-001 protein_coding Homo_sapiens 0 2041
ENST00000420893 FAM13B-003 protein_coding Homo_sapiens 0 1748
ENST00000425075 FAM13B-002 protein_coding Homo_sapiens 0 961
ENST00000502471 FAM13B-007 protein_coding Homo_sapiens 0 771
ENST00000505281 FAM13B-010 retained_intron Homo_sapiens 0 405
ENST00000505961 FAM13B-005 protein_coding Homo_sapiens 0 335
ENST00000508403 FAM13B-006 protein_coding Homo_sapiens 0 390
ENST00000509596 FAM13B-008 protein_coding Homo_sapiens 0 749
ENST00000510804 FAM13B-009 retained_intron Homo_sapiens 0 355
ENST00000513640 FAM13B-011 retained_intron Homo_sapiens 5.00264e-43 178
ENST00000514310 FAM13B-004 protein_coding Homo_sapiens 0 946

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