C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratinocyte associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040888 Krtcap2-001 ENSMUSG00000042747 10090 + 3:89245966-89249906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040888
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040888 26.120±11.67 134.760±21.20 16.386±0.83 35.980±16.92 59.746±22.88 14.407±7.60 55.026±7.62 36.861±22.04 56.913±1.98 3.023±0.82 34.748±21.99 14.942±8.28 19.059±3.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064S CIL_00064S_0002 CGP 3:89234177-89249906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004579 IC dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0008250 IDA oligosaccharyltransferase complex
GO:0016021 IEA integral component of membrane
GO:0018279 IC protein N-linked glycosylation via asparagine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295682 KRTCAP2-001 protein_coding Homo_sapiens 0 564
ENST00000461136 KRTCAP2-011 processed_transcript Homo_sapiens 0 309
ENST00000463527 KRTCAP2-005 processed_transcript Homo_sapiens 0 263
ENST00000471891 KRTCAP2-009 processed_transcript Homo_sapiens 0 357
ENST00000473363 RP11-201K10.3-001 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000482246 KRTCAP2-012 processed_transcript Homo_sapiens 0 204
ENST00000487350 KRTCAP2-008 processed_transcript Homo_sapiens 0 531
ENST00000490672 KRTCAP2-003 processed_transcript Homo_sapiens 0 265
ENST00000491084 KRTCAP2-006 processed_transcript Homo_sapiens 0 531
ENST00000492892 KRTCAP2-010 processed_transcript Homo_sapiens 0 481
ENST00000497317 KRTCAP2-004 processed_transcript Homo_sapiens 0 542

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