C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cAMP responsive element binding protein 3-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041093 Creb3l2-001 ENSMUSG00000038648 10090 - 6:37327255-37442146 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041093 9.811±1.68 30.769±2.64 11.792±0.57 1.227±0.63 7.180±1.77 5.143±1.10 5.427±1.46 11.483±0.41 2.470±0.76 14.090±1.23 2.230±0.41 21.697±5.79 14.471±7.73 0.820±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011O CIL_00011O_0002 CGP 6:36846022-37442146
CIL_0002Q5 CIL_0002Q5_0002 CGP 6:37327255-37568815

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0002062 IMP chondrocyte differentiation
GO:0005634 ISS nucleus
GO:0005783 ISS endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006888 IMP ER to Golgi vesicle-mediated transport
GO:0006986 IEA response to unfolded protein
GO:0016021 IEA integral component of membrane
GO:0034976 ISS response to endoplasmic reticulum stress
GO:0035497 IMP cAMP response element binding
GO:0044212 IMP transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051216 IMP cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330387 CREB3L2-001 protein_coding Homo_sapiens 0 1860
ENST00000452463 CREB3L2-003 protein_coding Homo_sapiens 0 710
ENST00000456390 CREB3L2-002 protein_coding Homo_sapiens 0 1574
ENST00000468127 CREB3L2-004 processed_transcript Homo_sapiens 0 243
ENST00000616381 CREB3L2-201 protein_coding Homo_sapiens 0 1314
ENST00000620715 CREB3L2-202 protein_coding Homo_sapiens 0 634

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