C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ectodermal-neural cortex 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041623 Enc1-201 ENSMUSG00000041773 10090 + 13:97241105-97253039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041623 6.138±2.01 3.559±0.70 3.121±0.52 108.137±11.64 6.105±0.80 4.437±0.29 2.406±0.34 1.716±0.17 1.573±1.00 4.890±0.73 0.365±0.05 13.356±3.21 7.376±1.83 3.642±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028E CIL_00028E_0002 CGP 13:97176332-97253039

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0005730 IEA nucleolus
GO:0005737 ISS cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007275 IEA multicellular organismal development
GO:0010499 ISS proteasomal ubiquitin-independent protein catabolic process
GO:0010976 IEA positive regulation of neuron projection development
GO:0016363 IEA nuclear matrix
GO:0016567 ISS protein ubiquitination
GO:0017148 ISS negative regulation of translation
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043025 IEA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302351 ENC1-001 protein_coding Homo_sapiens 0 3070
ENST00000508331 ENC1-005 protein_coding Homo_sapiens 0 222
ENST00000509284 ENC1-006 processed_transcript Homo_sapiens 0 350
ENST00000510316 ENC1-002 protein_coding Homo_sapiens 0 2811
ENST00000537006 ENC1-201 protein_coding Homo_sapiens 0 2425
ENST00000618628 ENC1-202 protein_coding Homo_sapiens 0 3001

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