C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041905 Nupl1-201 ENSMUSG00000063895 10090 - 14:60219204-60251507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041905
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041905 3.802±1.16 9.220±3.51 7.398±0.00 11.621±0.00 5.016±3.18 8.293±4.14 1.628±0.89 3.113±1.10 3.799±0.79 5.053±1.54 1.357±0.00 11.402±6.27 5.806±0.99 19.900±13.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RX CIL_0000RX_0002 CGP 14:60219204-60302370

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005487 IEA nucleocytoplasmic transporter activity
GO:0005515 IPI protein binding
GO:0005643 IEA nuclear pore
GO:0006913 IEA nucleocytoplasmic transport
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381718 NUPL1-007 protein_coding Homo_sapiens 0 2597
ENST00000381736 NUPL1-001 protein_coding Homo_sapiens 0 2368
ENST00000381747 NUPL1-009 protein_coding Homo_sapiens 0 1511
ENST00000394327 NUPL1-004 protein_coding Homo_sapiens 0 1622
ENST00000463407 NUPL1-005 protein_coding Homo_sapiens 0 1511
ENST00000466694 NUPL1-002 processed_transcript Homo_sapiens 0 1245
ENST00000477876 NUPL1-003 processed_transcript Homo_sapiens 0 558
ENST00000495460 NUPL1-006 processed_transcript Homo_sapiens 0 481

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