C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042052 Hectd1-201 ENSMUSG00000035247 10090 - 12:51743722-51829536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042052
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042052 10.542±3.02 7.939±1.91 18.063±3.41 16.197±4.29 8.561±3.51 5.087±1.92 9.352±2.27 9.415±0.80 12.295±5.79 10.242±1.97 7.769±2.24 15.378±9.28 15.472±7.15 6.991±2.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EG CIL_0004EG_0002 CGP 12:51690966-51829536
CIL_0004EH CIL_0004EH_0002 CGP 12:51743722-51971321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000076344 hectd1-001 protein_coding Danio_rerio 0 2671
ENST00000399332 HECTD1-201 protein_coding Homo_sapiens 0 11670
ENST00000553616 HECTD1-009 retained_intron Homo_sapiens 0 468
ENST00000553700 HECTD1-001 protein_coding Homo_sapiens 0 11950
ENST00000553957 HECTD1-005 protein_coding Homo_sapiens 0 3219
ENST00000554027 HECTD1-014 retained_intron Homo_sapiens 0 486
ENST00000554471 HECTD1-010 protein_coding Homo_sapiens 0 872
ENST00000554850 HECTD1-011 retained_intron Homo_sapiens 0 268
ENST00000554882 HECTD1-006 protein_coding Homo_sapiens 0 4634
ENST00000555843 HECTD1-007 retained_intron Homo_sapiens 0 4512
ENST00000555915 HECTD1-013 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000556004 HECTD1-017 retained_intron Homo_sapiens 0 503
ENST00000556224 HECTD1-003 protein_coding Homo_sapiens 0 3936
ENST00000556281 HECTD1-019 retained_intron Homo_sapiens 0 658
ENST00000556474 HECTD1-004 processed_transcript Homo_sapiens 0 490
ENST00000557321 HECTD1-015 retained_intron Homo_sapiens 0 398
ENST00000557369 HECTD1-012 protein_coding Homo_sapiens 0 486
ENST00000557695 HECTD1-016 retained_intron Homo_sapiens 0 396
ENST00000611816 HECTD1-202 protein_coding Homo_sapiens 0 11520

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