C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroblastoma, suppression of tumorigenicity 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042844 Nbl1-001 ENSMUSG00000041120 10090 - 4:139082284-139092993 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042844 143.967±90.07 60.750±11.85 155.861±4.27 14.261±2.81 62.423±12.65 104.072±16.76 10.913±0.87 15.296±2.01 0.799±0.44 171.039±44.85 7.032±0.42 157.249±59.82 10.252±5.14 3.518±1.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0007399 IMP nervous system development
GO:0016015 IDA morphogen activity
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0035582 IDA sequestering of BMP in extracellular matrix
GO:0036122 IDA BMP binding
GO:0045666 IDA positive regulation of neuron differentiation
GO:0048263 IMP determination of dorsal identity
GO:0048812 IDA neuron projection morphogenesis
GO:0090027 IDA negative regulation of monocyte chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289749 NBL1-002 protein_coding Homo_sapiens 0 689
ENST00000375136 NBL1-001 protein_coding Homo_sapiens 0 835
ENST00000425400 NBL1-006 protein_coding Homo_sapiens 0 514
ENST00000427894 NBL1-008 protein_coding Homo_sapiens 0 641
ENST00000428975 NBL1-004 protein_coding Homo_sapiens 0 521
ENST00000439278 NBL1-007 protein_coding Homo_sapiens 0 422
ENST00000439664 NBL1-005 protein_coding Homo_sapiens 0 488
ENST00000451758 NBL1-003 protein_coding Homo_sapiens 0 555
ENST00000548815 NBL1-201 protein_coding Homo_sapiens 0 822
ENST00000602293 MINOS1-NBL1-003 nonsense_mediated_decay Homo_sapiens 0 510
ENST00000602384 MINOS1-NBL1-002 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000602450 MINOS1-NBL1-004 nonsense_mediated_decay Homo_sapiens 0 510
ENST00000602662 MINOS1-NBL1-001 protein_coding Homo_sapiens 0 821
ENST00000615215 NBL1-202 protein_coding Homo_sapiens 0 819
ENST00000618761 NBL1-203 protein_coding Homo_sapiens 0 821
ENST00000621723 NBL1-204 protein_coding Homo_sapiens 0 819
ENST00000622566 NBL1-205 protein_coding Homo_sapiens 0 817

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