C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium/calmodulin-dependent protein kinase IV
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042868 Camk4-201 ENSMUSG00000038128 10090 + 18:32939041-33195767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042868
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042868 0.154±0.03 0.448±0.07 0.058±0.01 4.338±3.80 0.778±0.48 0.301±0.13 0.043±0.00 0.268±0.05 0.155±0.08 0.340±0.10 0.024±0.03 0.132±0.07 0.113±0.08 1.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UQ CIL_0004UQ_0002 CGP 18:32837225-33195767
CIL_0004UT CIL_0004UT_0002 CGP 18:32939041-33213862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004683 TAS calmodulin-dependent protein kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0006468 IMP protein phosphorylation
GO:0006913 IDA nucleocytoplasmic transport
GO:0007165 IDA signal transduction
GO:0007270 IMP neuron-neuron synaptic transmission
GO:0007616 IEA long-term memory
GO:0043011 IEA myeloid dendritic cell differentiation
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046827 IDA positive regulation of protein export from nucleus
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282356 CAMK4-001 protein_coding Homo_sapiens 0 1594
ENST00000502916 CAMK4-008 processed_transcript Homo_sapiens 0 492
ENST00000504090 CAMK4-006 processed_transcript Homo_sapiens 0 309
ENST00000504544 CAMK4-009 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000505763 CAMK4-007 processed_transcript Homo_sapiens 0 473
ENST00000508074 CAMK4-005 protein_coding Homo_sapiens 0 527
ENST00000509408 CAMK4-011 processed_transcript Homo_sapiens 0 551
ENST00000509645 CAMK4-002 retained_intron Homo_sapiens 0 466
ENST00000510858 CAMK4-013 processed_transcript Homo_sapiens 0 357
ENST00000512453 CAMK4-004 protein_coding Homo_sapiens 0 1459
ENST00000512890 CAMK4-012 processed_transcript Homo_sapiens 0 300
ENST00000514007 CAMK4-010 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000515231 CAMK4-003 nonsense_mediated_decay Homo_sapiens 0 1098
ENST00000595191 MYO1F-005 retained_intron Homo_sapiens 0.00000000001 75

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