C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, GRF-type containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043108 Zgrf1-201 ENSMUSG00000051278 10090 + 3:127553489-127618021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043108
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043108 0.189±0.11 0.119±0.02 0.256±0.08 0.740±0.27 0.213±0.05 0.179±0.12 0.076±0.04 0.116±0.01 1.156±1.35 0.235±0.03 0.135±0.05 0.505±0.30 0.734±0.42 1.110±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WR CIL_0008WR_0002 VISTA 3:127326841-127927904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264370 ZGRF1-006 retained_intron Homo_sapiens 0 503
ENST00000309071 ZGRF1-001 protein_coding Homo_sapiens 0 503
ENST00000445203 ZGRF1-201 protein_coding Homo_sapiens 0 2436
ENST00000445413 ZGRF1-009 nonsense_mediated_decay Homo_sapiens 0 1463
ENST00000473015 ZGRF1-002 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000502805 ZGRF1-011 nonsense_mediated_decay Homo_sapiens 9.99995e-41 171
ENST00000503172 ZGRF1-010 protein_coding Homo_sapiens 0 424
ENST00000505019 ZGRF1-003 protein_coding Homo_sapiens 0 2436
ENST00000506675 ZGRF1-008 retained_intron Homo_sapiens 0 1507
ENST00000512075 ZGRF1-005 retained_intron Homo_sapiens 0 261
ENST00000514770 ZGRF1-004 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000612287 ZGRF1-202 protein_coding Homo_sapiens 0 1020

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