C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 2 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043716 Cinp-201 ENSMUSG00000021276 10090 - 12:110872610-110889145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043716
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043716 8.718±1.12 13.625±2.84 12.396±0.50 12.568±2.44 9.010±2.67 8.934±1.62 5.976±0.60 6.246±1.07 7.304±5.23 8.364±1.23 3.547±1.03 12.705±4.58 12.448±4.49 2.371±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_00040P CIL_00040P_0002 CGP 12:110850279-110889145
CIL_00040U CIL_00040U_0002 CGP 12:110872610-110972394

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216756 CINP-001 protein_coding Homo_sapiens 0 464
ENST00000536961 CINP-004 protein_coding Homo_sapiens 0 451
ENST00000541568 CINP-007 protein_coding Homo_sapiens 1e-35 154
ENST00000559504 CINP-003 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000559514 CINP-002 nonsense_mediated_decay Homo_sapiens 0 464

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