C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043739 Elovl3-001 ENSMUSG00000038754 10090 + 19:46131897-46135307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043739
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043739 1.488±0.53 4.609±1.75 4.566±3.48 0.308±0.17 1.552±0.60 1.354±1.23 0.615±0.43 0.069±0.03 0.089±0.06 0.008±0.00 0.179±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WG CIL_0005WG_0002 CGP 19:46075863-46135307
CIL_0005WH CIL_0005WH_0002 CGP 19:46131897-46148326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0019367 IMP fatty acid elongation, saturated fatty acid
GO:0034625 IMP fatty acid elongation, monounsaturated fatty acid
GO:0034626 IEA fatty acid elongation, polyunsaturated fatty acid
GO:0042761 IMP very long-chain fatty acid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370005 ELOVL3-001 protein_coding Homo_sapiens 0 682

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