C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043914 Ints9-201 ENSMUSG00000021975 10090 + 14:64950045-65039835 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043914 7.956±0.70 5.557±0.88 7.950±0.20 7.004±4.13 9.171±0.67 8.134±1.27 5.134±0.46 6.132±0.84 5.304±2.51 7.584±1.00 3.741±0.16 9.886±2.66 5.361±2.09 9.141±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000935 CIL_000935_0002 VISTA 14:64945073-65546192
CIL_0000RT CIL_0000RT_0002 CGP 14:64950045-65098106

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016180 IEA snRNA processing
GO:0032039 IEA integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000416984 INTS9-002 protein_coding Homo_sapiens 0 2194
ENST00000518510 INTS9-011 nonsense_mediated_decay Homo_sapiens 0 702
ENST00000519578 INTS9-016 processed_transcript Homo_sapiens 0 473
ENST00000520005 INTS9-015 retained_intron Homo_sapiens 0 320
ENST00000520316 INTS9-017 retained_intron Homo_sapiens 0 470
ENST00000520437 INTS9-012 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000520831 INTS9-009 retained_intron Homo_sapiens 0 296
ENST00000520983 INTS9-006 retained_intron Homo_sapiens 0 1411
ENST00000521022 INTS9-001 protein_coding Homo_sapiens 0 2579
ENST00000521070 INTS9-014 processed_transcript Homo_sapiens 0 339
ENST00000521777 INTS9-004 protein_coding Homo_sapiens 0 2525
ENST00000522074 INTS9-013 retained_intron Homo_sapiens 0 510
ENST00000522363 INTS9-005 nonsense_mediated_decay Homo_sapiens 0 2194
ENST00000523303 INTS9-007 nonsense_mediated_decay Homo_sapiens 0 2100
ENST00000523436 INTS9-010 protein_coding Homo_sapiens 0 863
ENST00000524081 INTS9-020 protein_coding Homo_sapiens 0 416

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