C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 653
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043922 Zfp653-201 ENSMUSG00000038895 10090 - 9:22055460-22071345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000043922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000043922 3.890±0.45 5.858±1.78 4.577±0.67 8.710±1.67 2.768±0.00 4.135±0.29 5.352±0.00 3.792±0.50 3.170±0.66 6.484±1.84 2.160±0.29 8.768±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000764 CIL_000764_0002 CGP 9:22055460-22085438

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293771 ZNF653-001 protein_coding Homo_sapiens 0 2087
ENST00000585656 CTC-398G3.6-001 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000588541 ZNF653-008 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000589051 ZNF653-007 protein_coding Homo_sapiens 0 383
ENST00000590296 ZNF653-005 protein_coding Homo_sapiens 0 259
ENST00000590548 ZNF653-003 retained_intron Homo_sapiens 0 1284
ENST00000593191 ZNF653-004 processed_transcript Homo_sapiens 0 241

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