C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lin-37 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043975 Lin37-001 ENSMUSG00000036845 10090 - 7:30555441-30559646 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000043975
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000043975 18.929±2.65 28.248±5.50 16.240±1.43 21.932±2.01 20.683±1.85 12.173±1.14 11.689±3.69 21.437±1.62 20.601±4.12 15.626±1.81 18.675±2.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0017053 IEA transcriptional repressor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301159 LIN37-001 protein_coding Homo_sapiens 0 881
ENST00000587108 LIN37-012 retained_intron Homo_sapiens 0 520
ENST00000590706 LIN37-002 retained_intron Homo_sapiens 0 562
ENST00000591163 LIN37-008 protein_coding Homo_sapiens 0 276
ENST00000591613 AC002398.9-001 nonsense_mediated_decay Homo_sapiens 0 819
ENST00000592871 LIN37-011 retained_intron Homo_sapiens 0 250
ENST00000595455 LIN37-013 nonsense_mediated_decay Homo_sapiens 0 501

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