C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: somatostatin receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044299 Sstr1-201 ENSMUSG00000035431 10090 + 12:58211804-58214444 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaENSMUST00000044299
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta
ENSMUST00000044299 0.216±0.00 0.029±0.00 1.099±0.00 0.095±0.04 2.909±0.00 0.016±0.00 0.021±0.00 0.114±0.03 0.764±0.65 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VU CIL_0003VU_0002 CGP 12:58211772-58269258

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004994 ISO somatostatin receptor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007186 IMP G-protein coupled receptor signaling pathway
GO:0007215 IDA glutamate receptor signaling pathway
GO:0007218 IDA neuropeptide signaling pathway
GO:0007283 IEA spermatogenesis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0021549 IEA cerebellum development
GO:0030900 IEA forebrain development
GO:0042594 IEA response to starvation
GO:0071392 IEA cellular response to estradiol stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267377 SSTR1-002 protein_coding Homo_sapiens 0 1640
ENST00000610913 SSTR3-001 protein_coding Homo_sapiens 0.0000000007 71
ENST00000617123 SSTR3-002 protein_coding Homo_sapiens 0.0000000003 71

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