C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V1 subunit H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044369 Atp6v1h-201 ENSMUSG00000033793 10090 + 1:5083173-5162549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044369
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044369 11.928±5.45 42.136±4.42 14.884±2.99 35.210±21.58 14.114±2.81 12.489±1.48 3.330±0.73 32.446±3.28 11.691±3.07 13.002±3.05 2.390±0.81 14.394±5.70 29.493±15.77 14.918±4.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053U CIL_00053U_0002 CGP 1:4909576-5162549
CIL_00053P CIL_00053P_0002 CGP 1:5083173-5606131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000221 IEA vacuolar proton-transporting V-type ATPase, V1 domain
GO:0005515 IEA protein binding
GO:0005765 IEA lysosomal membrane
GO:0006897 IEA endocytosis
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355221 ATP6V1H-001 protein_coding Homo_sapiens 0 1210
ENST00000359530 ATP6V1H-002 protein_coding Homo_sapiens 0 2015
ENST00000396774 ATP6V1H-005 protein_coding Homo_sapiens 0 1975
ENST00000518072 ATP6V1H-019 retained_intron Homo_sapiens 0 254
ENST00000519588 ATP6V1H-013 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000519922 ATP6V1H-012 retained_intron Homo_sapiens 1e-33 147
ENST00000520188 ATP6V1H-004 protein_coding Homo_sapiens 0 1866
ENST00000521275 ATP6V1H-010 protein_coding Homo_sapiens 0 409
ENST00000521335 ATP6V1H-003 retained_intron Homo_sapiens 0 296
ENST00000521377 ATP6V1H-008 retained_intron Homo_sapiens 0 566
ENST00000521707 ATP6V1H-011 retained_intron Homo_sapiens 0 449
ENST00000521900 ATP6V1H-015 processed_transcript Homo_sapiens 0 455
ENST00000522849 ATP6V1H-014 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000523343 ATP6V1H-020 processed_transcript Homo_sapiens 2e-36 156
ENST00000523426 ATP6V1H-017 processed_transcript Homo_sapiens 0 344
ENST00000523899 ATP6V1H-021 processed_transcript Homo_sapiens 0 228
ENST00000524164 ATP6V1H-009 nonsense_mediated_decay Homo_sapiens 0 1683
ENST00000524234 ATP6V1H-006 protein_coding Homo_sapiens 0 405

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