C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PTK7 protein tyrosine kinase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044442 Ptk7-201 ENSMUSG00000023972 10090 - 17:46564451-46629504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044442 22.969±20.75 3.855±0.80 5.358±1.00 5.532±2.34 6.202±3.01 7.813±2.65 1.011±0.31 3.465±0.50 1.857±1.69 23.061±1.75 0.216±0.05 28.993±5.23 3.504±1.51 1.294±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001736 IMP establishment of planar polarity
GO:0001843 IGI neural tube closure
GO:0003401 IMP axis elongation
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005925 IEA focal adhesion
GO:0007155 IEA cell adhesion
GO:0010976 IEA positive regulation of neuron projection development
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016477 IEA cell migration
GO:0031532 IEA actin cytoskeleton reorganization
GO:0042060 IGI wound healing
GO:0045198 IMP establishment of epithelial cell apical/basal polarity
GO:0060026 IMP convergent extension
GO:0060070 IEA canonical Wnt signaling pathway
GO:0060484 IMP lung-associated mesenchyme development
GO:0071300 IEA cellular response to retinoic acid
GO:0090103 IMP cochlea morphogenesis
GO:0090179 IGI planar cell polarity pathway involved in neural tube closure

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230418 PTK7-007 nonsense_mediated_decay Homo_sapiens 0 2760
ENST00000230419 PTK7-001 protein_coding Homo_sapiens 0 4161
ENST00000345201 PTK7-006 protein_coding Homo_sapiens 0 2368
ENST00000349241 PTK7-004 protein_coding Homo_sapiens 0 2366
ENST00000352931 PTK7-005 protein_coding Homo_sapiens 0 2113
ENST00000461100 PTK7-019 nonsense_mediated_decay Homo_sapiens 0 481
ENST00000461389 PTK7-021 nonsense_mediated_decay Homo_sapiens 0 828
ENST00000470019 PTK7-002 nonsense_mediated_decay Homo_sapiens 0 3426
ENST00000471863 PTK7-003 protein_coding Homo_sapiens 0 1336
ENST00000473339 PTK7-020 protein_coding Homo_sapiens 0 902
ENST00000481273 PTK7-009 protein_coding Homo_sapiens 0 3812
ENST00000481946 PTK7-015 protein_coding Homo_sapiens 0 490
ENST00000487673 PTK7-008 retained_intron Homo_sapiens 0 2338
ENST00000489707 PTK7-012 protein_coding Homo_sapiens 0 1393
ENST00000493339 PTK7-011 retained_intron Homo_sapiens 0 420
ENST00000494146 PTK7-018 nonsense_mediated_decay Homo_sapiens 0 481
ENST00000497957 PTK7-017 nonsense_mediated_decay Homo_sapiens 0 710

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