C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ectopic P-granules autophagy protein 5 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044622 Epg5-201 ENSMUSG00000039840 10090 + 18:77938467-78035027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044622 3.975±1.18 3.853±2.24 3.212±0.19 2.689±0.64 3.310±1.92 3.579±0.51 0.728±0.16 3.279±1.07 2.727±0.76 2.610±0.46 3.625±0.61 4.753±1.15 3.023±0.93 1.609±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093J CIL_00093J_0002 VISTA 18:77936924-78539279

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006914 IMP autophagy
GO:0032456 IMP endocytic recycling
GO:0097352 IMP autophagic vacuole maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282041 EPG5-001 protein_coding Homo_sapiens 0 7382
ENST00000585906 EPG5-002 processed_transcript Homo_sapiens 0 4250
ENST00000587884 EPG5-006 nonsense_mediated_decay Homo_sapiens 0 2911
ENST00000587974 EPG5-003 retained_intron Homo_sapiens 0 4229
ENST00000590854 EPG5-009 protein_coding Homo_sapiens 0 1380
ENST00000590884 EPG5-005 nonsense_mediated_decay Homo_sapiens 0 2073
ENST00000592272 EPG5-004 nonsense_mediated_decay Homo_sapiens 0 2704

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