C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding 1 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044937 Lman1l-002 ENSMUSG00000056271 10090 - 9:57607085-57620774 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044937
Transcript ID Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044937 0.037±0.00 0.024±0.00 0.109±0.00 0.033±0.00 0.007±0.00 0.021±0.00 0.041±0.00 0.034±0.01 0.139±0.08 0.049±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309664 LMAN1L-001 protein_coding Homo_sapiens 0 763
ENST00000379709 LMAN1L-004 protein_coding Homo_sapiens 0 540
ENST00000568467 LMAN1L-006 retained_intron Homo_sapiens 2e-28 130

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