C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044954 Slc30a1-001 ENSMUSG00000037434 10090 + 1:191906767-191913247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044954 5.985±2.66 17.135±3.12 5.948±0.23 4.134±0.48 5.545±3.54 9.912±5.10 3.161±0.42 12.754±0.97 6.905±1.84 14.430±3.03 1.503±0.32 7.084±4.74 14.054±5.02 9.279±2.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042A CIL_00042A_0002 CGP 1:191821444-191913247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005385 ISO zinc ion transmembrane transporter activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 ISO plasma membrane
GO:0006829 IDA zinc ion transport
GO:0006874 IDA cellular calcium ion homeostasis
GO:0006882 IDA cellular zinc ion homeostasis
GO:0019855 IDA calcium channel inhibitor activity
GO:0030315 IEA T-tubule
GO:0031965 IEA nuclear membrane
GO:0046929 IEA negative regulation of neurotransmitter secretion
GO:0070509 IEA calcium ion import
GO:0070574 IEA cadmium ion transmembrane transport
GO:0071577 IEA zinc ion transmembrane transport
GO:0071584 IDA negative regulation of zinc ion transmembrane import
GO:0071585 IEA detoxification of cadmium ion
GO:0090281 IDA negative regulation of calcium ion import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367001 SLC30A1-001 protein_coding Homo_sapiens 0 1951

Loading