C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046038 Slc25a28-201 ENSMUSG00000040414 10090 - 19:43663822-43674881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046038 15.110±2.09 24.470±7.34 12.866±0.98 13.635±3.43 10.017±3.37 11.745±2.77 9.792±1.60 21.455±2.20 9.069±2.71 11.142±0.71 14.001±2.25 25.357±6.64 7.429±1.84 19.037±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054S CIL_00054S_0002 CGP 19:43612325-43674881
CIL_00054R CIL_00054R_0002 CGP 19:43663822-43733697

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370495 SLC25A28-001 protein_coding Homo_sapiens 0 1676
ENST00000434701 SLC25A28-006 protein_coding Homo_sapiens 0 904
ENST00000479722 SLC25A28-005 retained_intron Homo_sapiens 0 536
ENST00000496035 SLC25A28-004 processed_transcript Homo_sapiens 0 968

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