C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin type III domain containing 3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046157 Fndc3b-201 ENSMUSG00000039286 10090 - 3:27416162-27710439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046157 10.283±0.96 11.420±5.53 6.683±0.14 1.674±1.13 5.195±2.34 6.638±1.32 3.265±0.26 2.794±0.74 2.582±1.34 5.550±1.53 1.224±0.43 8.310±2.86 23.487±12.63 1.413±0.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0016477 IMP cell migration
GO:0034446 IMP substrate adhesion-dependent cell spreading
GO:0045600 IDA positive regulation of fat cell differentiation
GO:0045668 IMP negative regulation of osteoblast differentiation
GO:0048146 IMP positive regulation of fibroblast proliferation
GO:0060510 IMP Type II pneumocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336824 FNDC3B-001 protein_coding Homo_sapiens 0 4244
ENST00000415807 FNDC3B-004 protein_coding Homo_sapiens 0 4157
ENST00000416957 FNDC3B-003 protein_coding Homo_sapiens 0 4056
ENST00000423424 FNDC3B-008 protein_coding Homo_sapiens 0 327
ENST00000443501 FNDC3B-006 protein_coding Homo_sapiens 0 652
ENST00000469491 FNDC3B-005 retained_intron Homo_sapiens 0 2049
ENST00000478016 FNDC3B-010 retained_intron Homo_sapiens 0 209
ENST00000494000 FNDC3B-007 retained_intron Homo_sapiens 0 398

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