C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 16 (monocarboxylic acid transporters), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046212 Slc16a1-001 ENSMUSG00000032902 10090 + 3:104638668-104658462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046212
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046212 18.709±2.36 43.833±11.93 11.717±0.65 2.139±0.81 23.107±2.81 138.661±40.37 59.802±2.80 15.083±1.59 31.945±10.97 16.197±2.62 5.607±1.91 27.238±13.52 49.634±12.57 6.314±2.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000878 CIL_000878_0002 VISTA 3:104296935-104900599
CIL_0009BY CIL_0009BY_0002 VISTA 3:104296978-104900566

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005813 IEA centrosome
GO:0005886 ISS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006629 IMP lipid metabolic process
GO:0015293 IEA symporter activity
GO:0015355 IEA secondary active monocarboxylate transmembrane transporter activity
GO:0016020 IEA membrane
GO:0032094 IMP response to food
GO:0035873 IEA lactate transmembrane transport
GO:0035879 ISS plasma membrane lactate transport
GO:0042593 IMP glucose homeostasis
GO:0042803 IEA protein homodimerization activity
GO:0050796 IMP regulation of insulin secretion
GO:0051297 IEA centrosome organization
GO:0051780 IMP behavioral response to nutrient
GO:0070062 IEA extracellular vesicular exosome
GO:0071407 IEA cellular response to organic cyclic compound
GO:0097159 IEA organic cyclic compound binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369626 SLC16A1-001 protein_coding Homo_sapiens 0 1775
ENST00000429288 SLC16A1-003 protein_coding Homo_sapiens 0 721
ENST00000443580 SLC16A1-005 protein_coding Homo_sapiens 0 833
ENST00000458229 SLC16A1-002 protein_coding Homo_sapiens 0 1393
ENST00000486743 SLC16A1P1-001 processed_pseudogene Homo_sapiens 0 669
ENST00000538576 SLC16A1-201 protein_coding Homo_sapiens 0 1744

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