C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046389 Rbm45-001 ENSMUSG00000042369 10090 + 2:76369984-76383768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046389 4.544±1.31 13.767±3.55 9.735±0.70 10.103±0.80 9.297±2.07 9.882±2.31 1.439±0.72 5.327±0.88 4.657±1.81 5.894±2.91 2.805±0.67 12.645±5.48 11.260±4.25 2.608±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z2 CIL_0000Z2_0002 CGP 2:76369984-76600647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 ISS RNA binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0007399 ISS nervous system development
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286070 RBM45-001 protein_coding Homo_sapiens 0 1677
ENST00000424000 RBM45-002 retained_intron Homo_sapiens 0 1116
ENST00000424099 RBM45-006 protein_coding Homo_sapiens 0 346
ENST00000455903 RBM45-004 protein_coding Homo_sapiens 0 411
ENST00000493048 RBM45-003 retained_intron Homo_sapiens 0 551
ENST00000616198 RBM45-201 protein_coding Homo_sapiens 0 1711

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