C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline rich 7 (synaptic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046533 Prr7-201 ENSMUSG00000034686 10090 + 13:55464267-55473155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046533 1.908±1.25 6.297±1.53 2.669±0.00 26.359±4.98 4.002±2.56 1.738±0.24 0.216±0.04 0.293±0.00 0.326±0.27 1.739±0.12 0.174±0.05 6.284±3.34 0.408±0.30 6.807±3.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0000XA CIL_0000XA_0003 CGP 13:55445334-55473155
CIL_0000XB CIL_0000XB_0003 CGP 13:55464267-55488111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323249 PRR7-001 protein_coding Homo_sapiens 0 1509
ENST00000502922 PRR7-002 protein_coding Homo_sapiens 0 1561
ENST00000507881 PRR7-003 protein_coding Homo_sapiens 0 861
ENST00000510492 PRR7-004 protein_coding Homo_sapiens 0 1485

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