C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuron derived neurotrophic factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046770 Nenf-001 ENSMUSG00000037499 10090 - 1:191306789-191318194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046770 82.220±11.39 149.721±41.47 91.329±14.15 44.631±6.19 75.522±23.77 65.052±10.82 63.645±13.41 69.849±4.47 20.503±10.21 92.645±15.98 59.482±4.83 146.684±21.42 45.998±15.41 14.981±6.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JQ CIL_0008JQ_0002 VISTA 1:190939014-191541717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IDA extracellular space
GO:0008083 IDA growth factor activity
GO:0020037 IEA heme binding
GO:0043410 IDA positive regulation of MAPK cascade
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366988 NENF-001 protein_coding Homo_sapiens 0 623
ENST00000473900 NENF-003 processed_transcript Homo_sapiens 0 516
ENST00000479589 NENF-002 processed_transcript Homo_sapiens 0 366

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