C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 122
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046941 Rnf122-001 ENSMUSG00000039328 10090 + 8:31111820-31131482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046941
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046941 4.304±1.29 4.707±0.27 1.725±0.28 10.174±6.96 7.811±2.25 3.341±0.40 2.211±1.12 2.171±0.72 0.304±0.16 7.913±3.81 1.772±0.78 13.000±5.32 0.542±0.30 0.192±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Y CIL_00084Y_0002 VISTA 8:30621430-31226500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092836 RNF122-201 protein_coding Danio_rerio 0 300
ENSDART00000141551 RNF122-001 protein_coding Danio_rerio 0 265
ENST00000256257 RNF122-001 protein_coding Homo_sapiens 0 597

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