C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22 (organic cation transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046959 Slc22a2-201 ENSMUSG00000040966 10090 + 17:12584189-12628465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000046959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000046959 0.718±0.53 0.064±0.04 0.020±0.00 0.242±0.14 0.283±0.10 0.029±0.00 0.089±0.00 93.264±6.27 0.023±0.01 0.045±0.01 0.047±0.02 0.101±0.06 4.644±4.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0002 VISTA 17:12489717-13093070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005496 IEA steroid binding
GO:0005887 ISA integral component of plasma membrane
GO:0006812 IDA cation transport
GO:0015101 IDA organic cation transmembrane transporter activity
GO:0015220 IEA choline transmembrane transporter activity
GO:0015651 IEA quaternary ammonium group transmembrane transporter activity
GO:0015695 ISO organic cation transport
GO:0015697 IEA quaternary ammonium group transport
GO:0015871 IEA choline transport
GO:0016323 IEA basolateral plasma membrane
GO:0034220 IEA ion transmembrane transport
GO:0051608 IEA histamine transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366953 SLC22A2-001 protein_coding Homo_sapiens 0 1511
ENST00000486916 SLC22A2-002 processed_transcript Homo_sapiens 0 658
ENST00000491092 SLC22A2-004 processed_transcript Homo_sapiens 0 1086

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