C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor accessory protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047218 Reep4-201 ENSMUSG00000033589 10090 + 14:70545251-70548933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047218
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047218 14.042±2.08 16.581±1.17 42.694±9.80 2.657±1.62 15.766±3.48 30.380±6.16 2.520±0.49 6.763±1.59 13.251±9.83 18.360±1.14 0.912±0.31 18.302±6.82 21.401±11.14 59.386±26.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 ISS endoplasmic reticulum
GO:0005874 IEA microtubule
GO:0006998 ISS nuclear envelope organization
GO:0007067 IEA mitotic nuclear division
GO:0007084 ISS mitotic nuclear envelope reassembly
GO:0008017 ISS microtubule binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306306 REEP4-001 protein_coding Homo_sapiens 0 815
ENST00000334530 REEP4-002 protein_coding Homo_sapiens 0 508
ENST00000518664 REEP4-009 retained_intron Homo_sapiens 0 612
ENST00000519074 REEP4-003 retained_intron Homo_sapiens 0 508
ENST00000519875 REEP4-005 retained_intron Homo_sapiens 0 283
ENST00000521744 REEP4-007 protein_coding Homo_sapiens 8e-32 141
ENST00000523293 REEP4-004 protein_coding Homo_sapiens 0 606

Loading