C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lon peptidase 1, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047226 Lonp1-201 ENSMUSG00000041168 10090 - 17:56614301-56626903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047226 32.866±2.23 417.936±42.25 30.696±0.42 34.012±4.93 34.792±15.89 26.911±5.58 45.374±4.09 56.141±6.73 53.895±11.24 21.740±2.22 30.061±1.15 90.014±12.77 43.929±18.94 9.618±2.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L3 CIL_0006L3_0002 CGP 17:56613395-56626903
CIL_0005C5 CIL_0005C5_0002 CGP 17:56614301-56664456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003697 IDA single-stranded DNA binding
GO:0003727 IEA single-stranded RNA binding
GO:0004176 IDA ATP-dependent peptidase activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IBA mitochondrial matrix
GO:0006200 IDA ATP catabolic process
GO:0006508 IDA proteolysis
GO:0006515 IBA misfolded or incompletely synthesized protein catabolic process
GO:0007005 IBA mitochondrion organization
GO:0007568 IEA aging
GO:0009725 IEA response to hormone
GO:0010044 IEA response to aluminum ion
GO:0016020 IEA membrane
GO:0016887 IDA ATPase activity
GO:0034599 IEA cellular response to oxidative stress
GO:0042645 IEA mitochondrial nucleoid
GO:0043531 IEA ADP binding
GO:0043565 IEA sequence-specific DNA binding
GO:0043623 IEA cellular protein complex assembly
GO:0051131 IBA chaperone-mediated protein complex assembly
GO:0051260 IEA protein homooligomerization
GO:0051603 IEA proteolysis involved in cellular protein catabolic process
GO:0051880 IEA G-quadruplex DNA binding
GO:0070182 IEA DNA polymerase binding
GO:0070361 IDA mitochondrial light strand promoter anti-sense binding
GO:0070362 IEA mitochondrial heavy strand promoter anti-sense binding
GO:0070407 IEA oxidation-dependent protein catabolic process
GO:0090296 IEA regulation of mitochondrial DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360614 LONP1-001 protein_coding Homo_sapiens 0 2492
ENST00000540670 LONP1-002 protein_coding Homo_sapiens 0 2322
ENST00000585374 LONP1-003 protein_coding Homo_sapiens 0 2481
ENST00000587365 LONP1-015 protein_coding Homo_sapiens 5e-39 165
ENST00000587552 LONP1-008 retained_intron Homo_sapiens 0 1007
ENST00000589473 LONP1-016 protein_coding Homo_sapiens 0 470
ENST00000590511 LONP1-010 processed_transcript Homo_sapiens 7.00649e-43 178
ENST00000590558 LONP1-017 nonsense_mediated_decay Homo_sapiens 0 2082
ENST00000590728 LONP1-011 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000590729 LONP1-007 protein_coding Homo_sapiens 0 1973
ENST00000593119 LONP1-005 protein_coding Homo_sapiens 0 2466

Loading